PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc063408.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 125aa    MW: 14384.2 Da    PI: 10.0473
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc063408.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.56.4e-242391259
                           --SS-EEEEEEE--TT-SS-...........EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  2 dDgynWrKYGqKevkgsefp...........rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                           +Dgy+WrKYGqK ++++ +            rsYY+Ct +gC+v+k+ver ++dp++v++tYeg+Hnh+
  Cse_sc063408.1_g010.1 23 EDGYKWRKYGQKAIRNNSCKnfnvsmsqysyRSYYKCTIKGCNVRKHVERPSSDPTAVITTYEGKHNHQ 91
                           8**************98753333334444459************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
SSHRTLPDSR IIVQATSKID LLEDGYKWRK YGQKAIRNNS CKNFNVSMSQ YSYRSYYKCT  60
IKGCNVRKHV ERPSSDPTAV ITTYEGKHNH QALVSKNSIH DTTNDTTSQL KPNNHIGILR  120
LKEEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-38WRKY family protein