PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc062977.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 395aa MW: 45530.9 Da PI: 8.2471

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc062977.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.1	2.5e-17	46	141	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++k+ ++ + ++g + + +C+keg +++ + + +ek++r+++ + tgC+a+++++++ +gk++++k+ Cse_sc062977.1_g010.1 46 DMYSTYAEAGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGAPRHINVDtldpkhSEKQKRNTTLHVTGCQARIRLELDIvSGKYKLIKF 132 58*************99888.7887999999***9998888899998999999999***********99***** PP FAR1 82 eleHnHela 90 +HnH l Cse_sc062977.1_g010.1 133 IAKHNHMLI 141 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
SMRSPRPTLY EHTETPGGSI YWEPHVEGIV VPEEGKYYDT IEEAIDMYST YAEAGGFQIK 60 KAGQRLTKSG IVQAKYIMCN KEGAPRHINV DTLDPKHSEK QKRNTTLHVT GCQARIRLEL 120 DIVSGKYKLI KFIAKHNHML IPKEYKHFTK KQRKMTEAEK MFVVKAATNK IGATRAHNLL 180 TSMKGGYEYV HGXSDAQMLI NKMENRKLYV PNFTFQYKVE ESELVAMFWA DEVAKCNYKE 240 FGDIVSFDAT FRSNKSESEN SFFKSFTSPG ATLVSFMMSY ESAMERQRYI QEHLDFKTLD 300 AAPKCETKLA IERHAAKVYT RTIFLLVQTE IKEACWTCAI QELKIEERCE RVTVRDTNPA 360 AYRILNKEVA KELADEGETV ATEIFVDYKV YYFLV

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

SMRSPRPTLY EHTETPGGSI YWEPHVEGIV VPEEGKYYDT IEEAIDMYST YAEAGGFQIK  60
KAGQRLTKSG IVQAKYIMCN KEGAPRHINV DTLDPKHSEK QKRNTTLHVT GCQARIRLEL  120
DIVSGKYKLI KFIAKHNHML IPKEYKHFTK KQRKMTEAEK MFVVKAATNK IGATRAHNLL  180
TSMKGGYEYV HGXSDAQMLI NKMENRKLYV PNFTFQYKVE ESELVAMFWA DEVAKCNYKE  240
FGDIVSFDAT FRSNKSESEN SFFKSFTSPG ATLVSFMMSY ESAMERQRYI QEHLDFKTLD  300
AAPKCETKLA IERHAAKVYT RTIFLLVQTE IKEACWTCAI QELKIEERCE RVTVRDTNPA  360
AYRILNKEVA KELADEGETV ATEIFVDYKV YYFLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-16	FAR1 family protein