PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc062358.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 394aa    MW: 43002.8 Da    PI: 7.6803
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc062358.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.53.6e-06243262525
                            --SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                            +C  fa+ G C++G+ Ck+ H
  Cse_sc062358.1_g010.1 243 PCWSFAK-GSCRFGEACKYLH 262
                            677899*.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MTNDNPPPTL ALTLSDKLMA MNHLTTFVPE KQDVDAMNYS SWMYYFSHLC HGYGILDHLV  60
DPVGSSSTTP PTDPPPKEAE WTKIDFIIRT RLVDLNPKTA KAAWTHLAAI FQDNKRPRAM  120
ALNVELRNLK LEALSIDGYF QKIESIVSVL NGLGSPLSND DVVTFALEGL LSTYETISTI  180
IVSREPFPDL QTVRSLLTTH EMHLKSRVQD PLVDATSASP MVLVAKTHPT PRRGNSLEKV  240
NNPCWSFAKG SCRFGEACKY LHNGVHGKST LLPSTSDSIS GVSNVARSDM DMLQTLLAKF  300
GLNATNCFTN PSPVVYSVSQ PSALPFGSAH LSSQPTHVGP MSFLPGSVGG STSSLSGFFS  360
EGVQPQQGSF HRGFSRSRGF NSSLDPPRYQ LSSR