PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc062250.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 564aa MW: 65473 Da PI: 10.0565

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc062250.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.2	1.7e-15	64	158	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +r s++k+ r+g i+++ +vC++e +++ + + +k+ rt++ tgCka+ + ++ + + k+++t+++ Cse_sc062250.1_g010.1 64 MYMRYASEAGFCIRESTQKRL-RDGFIKEKYLVCNREECPNKIHLNtlapkkGDKQVRTSNFRITGCKARAVFHMIHgSRKYKLTTFD 150 8*************99887.9999*******999998888888887788888999999*********9****** PP FAR1 83 leHnHela 90 eHnHel Cse_sc062250.1_g010.1 151 VEHNHELD 158 ****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MLFDCVFYHL LFTTSSSLKT PSSFIHHNFI DTPGGSVFWV PRVVASVLPV LFSVYDSVED 60 CISMYMRYAS EAGFCIREST QKRLRDGFIK EKYLVCNREE CPNKIHLNTL APKKGDKQVR 120 TSNFRITGCK ARAVFHMIHG SRKYKLTTFD VEHNHELDRV EYKHLSKSER KLTYTEQLFI 180 IKASNYNLGE TSAHSLYTGL KGSSALFHGT KTEFNNLIRG INCFIGDSDA HMLINHMEDR 240 KNFASDFSFD YLVENAELIG LFWADQVAKL NYKKFGDIVS FDATYKTNKY RMVFVPFTAI 300 DNHRRYVTVG SGLLKNETTE SYVWLMQAFK KAFVRSPNII VTNQDGVMRK AIAKVLPDSK 360 HMLCMWHIMQ KLPSKIVSRI YDDTDFKNKF HKIVWNMYIG PEEFETRWNE LMVEFGILNH 420 KLLNKMYRSR ASWILTFFVD SPLCGLMRTT SRSEISRTPF FHISRLDNAT RVVRGQRNFL 480 FVEQVVGYAF IPNSLKLPKV IAYKISRIYK LNTKGFVLAT LVLRWRHLMP MTPSPSVSDV 540 VWIKSRSSEL RRPTLLKPEA VTCK

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MLFDCVFYHL LFTTSSSLKT PSSFIHHNFI DTPGGSVFWV PRVVASVLPV LFSVYDSVED  60
CISMYMRYAS EAGFCIREST QKRLRDGFIK EKYLVCNREE CPNKIHLNTL APKKGDKQVR  120
TSNFRITGCK ARAVFHMIHG SRKYKLTTFD VEHNHELDRV EYKHLSKSER KLTYTEQLFI  180
IKASNYNLGE TSAHSLYTGL KGSSALFHGT KTEFNNLIRG INCFIGDSDA HMLINHMEDR  240
KNFASDFSFD YLVENAELIG LFWADQVAKL NYKKFGDIVS FDATYKTNKY RMVFVPFTAI  300
DNHRRYVTVG SGLLKNETTE SYVWLMQAFK KAFVRSPNII VTNQDGVMRK AIAKVLPDSK  360
HMLCMWHIMQ KLPSKIVSRI YDDTDFKNKF HKIVWNMYIG PEEFETRWNE LMVEFGILNH  420
KLLNKMYRSR ASWILTFFVD SPLCGLMRTT SRSEISRTPF FHISRLDNAT RVVRGQRNFL  480
FVEQVVGYAF IPNSLKLPKV IAYKISRIYK LNTKGFVLAT LVLRWRHLMP MTPSPSVSDV  540
VWIKSRSSEL RRPTLLKPEA VTCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-44	FAR1 family protein