PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc061223.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 319aa MW: 35137.2 Da PI: 5.0951

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc061223.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.9	4.8e-33	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Cse_sc061223.1_g010.1 30 KPRLRWTADLHERFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 84 79****************************************************8 PP
2	Myb_DNA-binding	69	8.1e-22	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ Cse_sc061223.1_g010.1 32 RLRWTADLHERFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 83 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MNMDGRYGGV SGGGCYEFES GGVVMTRDPK PRLRWTADLH ERFVDAVTKL GGPDKATPKS 60 VLRLMGLKGL TLYHLKSHLQ KYRLGQQAKK QNNGDPNNEN SGDSYEPYIV HSTGTSSNSL 120 RVNHEAGDIP IADALLCQIE AQKRLQEQFE VQKKLQMRIE TQGKYLQGIL ENAQKSLSLD 180 MNSSSGNLEA TRAELTNFNL ALSDLMENLN GEXXXXXXXX SLDMNSSSGN LEATRAELTN 240 FNLALSDLME NLNGEQREQN ITKFTLDSKT GPPTVKEDIK IKTEGGGGDS ISFDLNTGGN 300 YDFIGTNQDL LALGFTRQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	4e-73	G2-like family protein