PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc060449.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 309aa    MW: 35920.2 Da    PI: 7.2806
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc060449.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.21.8e-28231501128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 
                            l pG+rF Ptd el+v+yLk+k+e  k + +    ev+iy++ P +L  k ++++ e++wyf + +++k+++g r+nr+tk  g+W+a
  Cse_sc060449.1_g010.1  23 LEPGYRFCPTDPELIVYYLKPKIEMGKRHPNCRYYEVNIYDCSPDELTpKpEYRSCENKWYFLTWTEHKHPNGIRRNRQTKnGGTWRA 110
                            579********************99997774569*************64457778899********************6664889*** PP

                    NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            + +  ++++ ++++v  + +Lv+ +   +k +kt W+m+ey+ 
  Cse_sc060449.1_g010.1 111 SQTCAAIKDVTNRVVESRLSLVYID---EKKRKTPWLMQEYTT 150
                            ************************4...44468********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAVINQEIIR YNNQEDHDYA DTLEPGYRFC PTDPELIVYY LKPKIEMGKR HPNCRYYEVN  60
IYDCSPDELT PKPEYRSCEN KWYFLTWTEH KHPNGIRRNR QTKNGGTWRA SQTCAAIKDV  120
TNRVVESRLS LVYIDEKKRK TPWLMQEYTT ENPDIPKESR KHNTNQNKVC NSDWVLCKIY  180
KKVPNQNVDN NLADQEAVII EQNHRLEKEP SPRRRRLSMN DQASYQSNGP EHVQIQESSH  240
HSGTDVQIAA PVQFMLTSNQ QSDLNNVHVG SSQTFPTISM NTSLNSITMQ HMPMLCGSNL  300
IQPPFECGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-28NAC family protein