PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc060229.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 308aa    MW: 35472.2 Da    PI: 10.0928
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc060229.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.7e-125498247
                           SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           g+W+ eEde l+++++++ ++ W++I   ++ gR++ +c srw+++
  Cse_sc060229.1_g010.1 54 GPWSSEEDEMLLNLFEKHDPNYWSLIITSIP-GRSDQSCWSRWLSL 98
                           89*****************************.***********976 PP
2Myb_DNA-binding40.94.9e-13103141545
                            -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                             +eEde l ++vk++G++ W++I + ++ gR++k c+ rw+
  Cse_sc060229.1_g010.1 103 MPEEDEMLQNLVKKHGPN-WSLIGKSIP-GRSAKTCRVRWF 141
                            59**************77.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MESDESRVTK MKNKMSFSKY RLRRKKGVTH RVHLRLAILS VNNSRKKDMD LIEGPWSSEE  60
DEMLLNLFEK HDPNYWSLII TSIPGRSDQS CWSRWLSLQR SFMPEEDEML QNLVKKHGPN  120
WSLIGKSIPG RSAKTCRVRW FSSPQIMPFT PEEDHTILLA HACYGDKWVS NAKKLIGRPY  180
DVIQNHWNST LKWKTNEAKI PHPSFSDINC GQGNSYIHDW NLNLAVAPSI SDMARDNMSS  240
GRTHSYSSDH SAPSLNALSK RDLSQTMSDS ANSPDVSPKK QCFEPVRPSR LSRFSSKKHT  300
KMSRFFEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.17e-33MYB family protein