PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc058456.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 877aa MW: 99892.1 Da PI: 5.9296

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc058456.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.7	3.5e-26	576	643	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLg.................vclTvLKriCRqyGIkRWPhRkiksl 52 e +isl++l++yF +++kdAAk++g vc+T+LKriCRq+GI+RWP+Rkik++ Cse_sc058456.1_g010.1 576 ERNISLQVLQQYFPGSLKDAAKSIGaylkianltiriasmfsVCPTTLKRICRQHGIMRWPSRKIKKV 643 689***************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 877 aa Download sequence
MSKHRINISS CSDFHFLKVE YNSFSSSLPS SHNHQFIRTN NVCETRTYLP SFLVAFKFFM 60 DYRTTTMFAS VKENDLDFVV PNEMSPDDAW FNSPNMSCST LMDFSSSYLD SADVYMTCFD 120 PNVCTQEIDM KPLDEYSEFF DDRFIQVIEY LNERCVLDTD LLVQLWLPVV RNGQRVLTTE 180 NQPFMVNSDS TNLSCYREVS KNYQFAAEYD SNETIGLPGR VFLKTFPTFT PDLRLVAEGS 240 DPRVTHAQKF NIYGCLNLPL YELDGETCVG VVEVVTTSQN VNFRAELESI FKALEVVDLR 300 SSDFLIHRKL KDFSEPYELV LAEIRDVLRS ICDTLKLPLA QTWGPSKGRS REDVDSISII 360 ESASYVFDPQ ILDFFEACSI QQLMQGEGIA GKALGTNQPC FTNIDDFCRA DYPLGQEARM 420 FGLNCAIAIR LHSTYTGPLD FVLEFFLPRD CKGHEEQNQM RNSIASMIKS LSWSLHVIRD 480 EEVVEPASFP IKETNTRDES WISHMLEAQK RGKNVILSMG CHKDEPEEEF QVINQYYHEL 540 TFAKPENQTY IEWGSRSRIA SSGTKRTGEK SRVKTERNIS LQVLQQYFPG SLKDAAKSIG 600 AYLKIANLTI RIASMFSVCP TTLKRICRQH GIMRWPSRKI KKVSHSLKKL QLVIDSVQGA 660 DGMLKLGSFY TNFPELNSQI PPSPKLKVND RVNHLKTQAT PSNSSSSCSR DSSSSTGNAI 720 HTAKTRGLVH EETVRSENEV IVHAQKKSSP VSLNDSVFRV KASYGDEKIR FKMSKHWGFG 780 DLHREITKRF NIYDMGNITL EYIDDESEWV LLACDADLEE CMDLHTSTKN PTIKLFVHQS 840 SHPSFMPMIH SNDDINMWHP TGTLLGSVGV FPYNDAY

Sequence ? help Back to Top

Protein Sequence Length: 877 aa Download sequence

MSKHRINISS CSDFHFLKVE YNSFSSSLPS SHNHQFIRTN NVCETRTYLP SFLVAFKFFM  60
DYRTTTMFAS VKENDLDFVV PNEMSPDDAW FNSPNMSCST LMDFSSSYLD SADVYMTCFD  120
PNVCTQEIDM KPLDEYSEFF DDRFIQVIEY LNERCVLDTD LLVQLWLPVV RNGQRVLTTE  180
NQPFMVNSDS TNLSCYREVS KNYQFAAEYD SNETIGLPGR VFLKTFPTFT PDLRLVAEGS  240
DPRVTHAQKF NIYGCLNLPL YELDGETCVG VVEVVTTSQN VNFRAELESI FKALEVVDLR  300
SSDFLIHRKL KDFSEPYELV LAEIRDVLRS ICDTLKLPLA QTWGPSKGRS REDVDSISII  360
ESASYVFDPQ ILDFFEACSI QQLMQGEGIA GKALGTNQPC FTNIDDFCRA DYPLGQEARM  420
FGLNCAIAIR LHSTYTGPLD FVLEFFLPRD CKGHEEQNQM RNSIASMIKS LSWSLHVIRD  480
EEVVEPASFP IKETNTRDES WISHMLEAQK RGKNVILSMG CHKDEPEEEF QVINQYYHEL  540
TFAKPENQTY IEWGSRSRIA SSGTKRTGEK SRVKTERNIS LQVLQQYFPG SLKDAAKSIG  600
AYLKIANLTI RIASMFSVCP TTLKRICRQH GIMRWPSRKI KKVSHSLKKL QLVIDSVQGA  660
DGMLKLGSFY TNFPELNSQI PPSPKLKVND RVNHLKTQAT PSNSSSSCSR DSSSSTGNAI  720
HTAKTRGLVH EETVRSENEV IVHAQKKSSP VSLNDSVFRV KASYGDEKIR FKMSKHWGFG  780
DLHREITKRF NIYDMGNITL EYIDDESEWV LLACDADLEE CMDLHTSTKN PTIKLFVHQS  840
SHPSFMPMIH SNDDINMWHP TGTLLGSVGV FPYNDAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	1e-153	Nin-like family protein