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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc057770.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 272aa MW: 31840.7 Da PI: 9.8892 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 46.4 | 1.3e-14 | 37 | 135 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkk.....tekerr........traetrtgCkaklkvkkekdgk 75 Y++YA+e GF+vrk ++ +k+n +e ++ f+C ++g++ ++k + + +++++r + + +kk++dgk Cse_sc057770.1_g010.1 37 AYKDYAREGGFEVRKGGQRVTKNNkEEPNNKYFYCVRQGFKPQNKPGnqktdK----QqttnplgvNNVTKRRKRASCRXLKKTTDGK 120 5**************999988665156788999*******9988776554431....1345577765555555555555789999*** PP FAR1 76 wevtkleleHnHela 90 ++v+k+ ++HnH+l+ Cse_sc057770.1_g010.1 121 YVVSKFLEKHNHSLV 135 ************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MVDLPAQNNE ADVQFITMEQ MVWCSQVFDN IELAQKAYKD YAREGGFEVR KGGQRVTKNN 60 KEEPNNKYFY CVRQGFKPQN KPGNQKTDKQ QTTNPLGVNN VTKRRKRASC RXLKKTTDGK 120 YVVSKFLEKH NHSLVYEDDM KYLRASRRLT FSKQQLINQL SNANIGPVRS WKVMKEVYGG 180 FEYIRATDVN CKNYRRGLNE FIGDRDAQMV VDKLLSRAEY FEDYYVEYKQ DKKSKEHVGL 240 LWADEQAKRN YAAFGDVVSF DATFRSNRYH GS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-28 | FAR1 family protein |