PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc057156.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 335aa    MW: 38943.6 Da    PI: 6.4437
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc057156.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.12.8e-13711243789
                   FAR1  37 kegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                             eg+++ ++k+  ++e ++r  trtgCka ++v+++++g+w+v+k++ eHnH++
  Cse_sc057156.1_g010.1  71 LEGFKDMNDKRqLRDEVKRRCITRTGCKALMQVTLSSQGEWVVDKFSDEHNHPF 124
                            5788777776646788899*********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSFSRIDSYQ EEEIISDENN DELEHMLIDD IDNNGYLIQE DVTHIYNRFL RYTIKKMHMI  60
FTTSMVYPRV LEGFKDMNDK RQLRDEVKRR CITRTGCKAL MQVTLSSQGE WVVDKFSDEH  120
NHPFDSPSKV IKQRSHSIFH RSSECKDVVI LLSKAGMKPS EITKVVNAFR GGEEDQLTRV  180
QCSAIIIEER KCNLGKECHG IIMHFKEKAE VDKDFYFAME INEDGVLQNV FWADGRSRTS  240
YCQFGDVVVF YVTYRTNKFS FPFAPFVGVN HHGQSILLGA TLLENETEKT FKWLFEQFLK  300
CMHECPPIAL ITDQDLAMGK AISKCYHRCM AISTM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-56FAR1 family protein