PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc056979.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 188aa MW: 21996.4 Da PI: 4.561 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 120.1 | 2e-37 | 9 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrF+Ptdeelvv++L++k++ + + ++i+++d+y ++PwdL+ k+ e k+wy+Fs+r+ +nr+t++gyW++ g Cse_sc056979.1_g010.1 9 LPPGFRFRPTDEELVVHFLQRKASLLPYHP-DIIPDLDLYPHDPWDLDGKALVEGKKWYYFSRRS--------QNRVTANGYWQSCGG 87 79*************************998.89**************977778899******985........589************ PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ +++++g+kk vf+ g+ap+g ktdW+m+e+r+ Cse_sc056979.1_g010.1 88 DEQIMSSnGNKKIGVKKYYVFHIGEAPEGIKTDWIMQEFRF 128 *****9967788***************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MGDNKNVNLP PGFRFRPTDE ELVVHFLQRK ASLLPYHPDI IPDLDLYPHD PWDLDGKALV 60 EGKKWYYFSR RSQNRVTANG YWQSCGGDEQ IMSSNGNKKI GVKKYYVFHI GEAPEGIKTD 120 WIMQEFRFCD GANSSRSRRR DNSKIDWVIC RVYEQNYDND DDEDGMELSC LDEVFMSLDD 180 YDDISFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 1e-68 | NAC family protein |