PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc055805.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-X1

Protein Properties

Length: 325aa MW: 36508.5 Da PI: 8.4221

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc055805.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	17.1	1.2e-05	60	79	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CGkH+C+k CH+G+C++Cp+ Cse_sc055805.1_g010.1 60 CGKHSCSKGCHKGECGKCPL 79 ******************95 PP
2	zf-NF-X1	16.8	1.4e-05	108	127	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCpp.Cp 19 CG+H+C + CH+G C + C+ Cse_sc055805.1_g010.1 108 CGIHRCPERCHRGTCVEmCR 127 ***************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MSCKKTCSRL FDCKVHCCDE VCHEGKCPPC RAKGVYTCQC VKVKEERDYC ERVFRCDIEC 60 GKHSCSKGCH KGECGKCPLQ GRRRTCPCGK RVYEGMACDG TCDTKLGCGI HRCPERCHRG 120 TCVEMCRIVV WKSCKCVSVK KQVPCYQDVV CERKYQRVRD CGRHASKRKC CDADCPPCSE 180 ICDKKLRCNA LPQSNNVSVA KEGMLWGLND VHDSLDSPPT VSLCSLNDGS LNMSLYEQQA 240 STIPRVKNLQ LQPPKIYQIQ AKNGTILYGA LYKPDTEKFG PPPYKTMLSV YGPGVQLVSD 300 SWANTVDMRA QYLRSKGILV ILQYE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	2e-72	NF-X1 family protein