PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc055755.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 361aa    MW: 41039.3 Da    PI: 5.4681
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc055755.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH185.2e-0689112226
                            -S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                            k  lC ff + G+C  G +CkF+H+
  Cse_sc055755.1_g010.1  89 KSILCEFFKA-GQCAKGFKCKFSHD 112
                            6679**7777.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MPPKQSKADV AKKQKVVEDK TFGLKNKNKS KNVQKYVQQI QQSAVPKPDP SKLAAKKKKD  60
EEKAREKELN EIFKVAVVQP KVPVGVDPKS ILCEFFKAGQ CAKGFKCKFS HDLNVQRKGE  120
KIDIFSDKRD EGTMEDWDLE TLEKVVESKG KEYNNQNKPT DIVCKHFLDA VEKKQYGWFW  180
VCPNGNKECH YRHALPPGYI LKSQMKALLE EEANKLAIED EIEDQRAKVK TTTPMTTDLF  240
MGWKKKKMDE KEAGMAALRA ERAKNDRMSG RELFLADASL FVDDAEAYEK YHREEEPDNS  300
NQKAQESSST SGPSTSTSVA AVSEEGNFDI DDDDDDLDMD ELNELEASLS RTSIQIKEPE  360
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-137C3H family protein