PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc054309.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 249aa MW: 27904 Da PI: 7.5027

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc054309.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.8e-13	81	128	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h+e+ErrRR+riN +++Lr l+P + K++Ka+ L ++++ Ik+L+ Cse_sc054309.1_g010.1 81 KSHSEAERRRRERINAHLDTLRGLVPCN-----DKMDKATLLAEVIRQIKQLK 128 58***********************8.....7***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MEFYGWTNPG FSNLGPNGFD GSLMNSSAFN EDYGNVDGLF MKSCESLVLD NEKSELVKGQ 60 SKVLGKKTVS ISDEKAVAAL KSHSEAERRR RERINAHLDT LRGLVPCNDK MDKATLLAEV 120 IRQIKQLKVN ATQASTGLLM PEDVDEVKIE KLDQLTVNGS LIFHASFCCK HRPELLTDVR 180 KALVDLKVHM ERAQLSYLGD HVKIIFDFTA NEDLVTSVRE ALTAVIEKGS ISPEYSLRTL 240 PNKRRRYCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	92	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	5e-27	bHLH family protein