PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc054289.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 449aa MW: 51743.4 Da PI: 4.7668

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc054289.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.7	2.9e-29	23	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 l+pG+rF Ptd el+v+yLk+k+e+ k + ev+iy++ P +L + ++++ e++wyf + +++k+++g+r+nr+tk g+W+a Cse_sc054289.1_g010.1 23 LQPGYRFCPTDPELIVYYLKPKIETGKRYPNCRYYEVNIYDYSPDELSAkpEYRSCENKWYFLTWTEQKHPNGNRQNRQTKnGGTWRA 110 579******************999955534599********84356777889****************6664889* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +v++ ++++vg + +Lv+ + +k +kt W+m+ey+ Cse_sc054289.1_g010.1 111 SQTCAAVKDVTNRVVGSRLSLVYID---EKKRKTPWLMQEYTT 150 **********************4...44468******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MAVINQEIIR YNNQKEHDYV DTLQPGYRFC PTDPELIVYY LKPKIETGKR YPNCRYYEVN 60 IYDYSPDELS AKPEYRSCEN KWYFLTWTEQ KHPNGNRQNR QTKNGGTWRA SQTCAAVKDV 120 TNRVVGSRLS LVYIDEKKRK TPWLMQEYTT KNPDIPKESQ KHNTNQNKMT EWVLCKIYKK 180 VPKQNANNNL ADQEEAIVEQ NHRLEEEPSP RRRRLSMADQ ASYQSNGPEH VQIQESSHHS 240 GTDVQIVEPM QFVLTSNQQS DLNNVHVGSS QTFPTISMKT SPNSITMQHI PMLCDSNLMQ 300 PPFECGSSTF GYYQNQSCPS STERIRFSSG ASSSSSMVLP QDEDATGHVV QLDDMMTCPA 360 PAVQMDTNLN PMTFSQTLTD DVFQQDFQNS YHDTPRLYEE PTIVPEAEYS SSNPGSVMEL 420 ENFLSFDPSE RISIDDLMDP PMDDFDWNM

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MAVINQEIIR YNNQKEHDYV DTLQPGYRFC PTDPELIVYY LKPKIETGKR YPNCRYYEVN  60
IYDYSPDELS AKPEYRSCEN KWYFLTWTEQ KHPNGNRQNR QTKNGGTWRA SQTCAAVKDV  120
TNRVVGSRLS LVYIDEKKRK TPWLMQEYTT KNPDIPKESQ KHNTNQNKMT EWVLCKIYKK  180
VPKQNANNNL ADQEEAIVEQ NHRLEEEPSP RRRRLSMADQ ASYQSNGPEH VQIQESSHHS  240
GTDVQIVEPM QFVLTSNQQS DLNNVHVGSS QTFPTISMKT SPNSITMQHI PMLCDSNLMQ  300
PPFECGSSTF GYYQNQSCPS STERIRFSSG ASSSSSMVLP QDEDATGHVV QLDDMMTCPA  360
PAVQMDTNLN PMTFSQTLTD DVFQQDFQNS YHDTPRLYEE PTIVPEAEYS SSNPGSVMEL  420
ENFLSFDPSE RISIDDLMDP PMDDFDWNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-27	NAC family protein