PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc053127.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 25725.1 Da PI: 4.9393 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.8 | 2.2e-14 | 55 | 98 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR+++N++++ Lr ++P+ + K++Ka+i + A++YI++L+ Cse_sc053127.1_g010.1 55 VSERNRRKKLNDRLFALRAVVPNiS------KMDKASIIKDAIDYIQHLH 98 57*********************66......*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MEDIGDDYKH YWETNMFLQN EEFDSWGGIE ETFSGYYDSS SPDGPQSSAA SKNIVSERNR 60 RKKLNDRLFA LRAVVPNISK MDKASIIKDA IDYIQHLHDQ ERVIQTEITE LESQKLESGV 120 LEYDQEMMFM STEKSKKKKV EQSYDSSESR TYPVEILELK VSYVGEKTVL VSLKCRKRRD 180 TMVKICEVFE TLKLNVVTAN VTAFSDTLFK TLFIQVPSFN FT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 179 | LKCRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29930.3 | 4e-80 | bHLH family protein |