PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc052517.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 388aa    MW: 44717.8 Da    PI: 6.1991
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc052517.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.52.4e-09159213149
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......te 49 
                            ++Yn+YA+ +GF+v+ks+++++ ++g ++++ ++C++eg +++ + +       ++
  Cse_sc052517.1_g010.1 159 EMYNKYAEVAGFEVKKSAQRNT-KSGLVKSKYLMCNREGVPKDININtldlkssDK 213
                            58**************998887.7888*************9987766666655433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MTDPPPSPLH HHDRSNTIIN PTPSLLHNHN CSSTITAPPR SPLHHHHQST TITAPPSSIH  60
HDHRSPLIME NNDVVDENIY EDELMVDAEV MNEDDTLVDA EIMEEEDTPV IQGPVMTPRP  120
TLYAHEETPG GSVYWEPVVD HIYLPVEGKK FKTIEECIEM YNKYAEVAGF EVKKSAQRNT  180
KSGLVKSKYL MCNREGVPKD ININTLDLKS SDKQVRNTRQ RKYVPNFTFH YMVEKSELVA  240
MFWADEVAKC NYKEFGDIVS FDATFRTNKI IYDSHRIPNE SHIFIYDSHI RYGVEIVIFR  300
YDMVFVPFTG IDNHKKCVTL GAGMLLREDE EAYTWLLKSF MTAHQKQPKM IVTDQDGAMK  360
LAIEAVFTES KHRLCMWHIT QKIPSKVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-22FAR1 family protein