PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc051313.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 370aa    MW: 41245.2 Da    PI: 8.5955
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc051313.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.81.7e-08123207381
                   FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                            Y +YA++ GF vrks +k+  r+g i+++ +v ++e  ++  + +      ++k++r+++ + tgCka+++ ++   + k+++t +
  Cse_sc051313.1_g010.1 123 YMKYASKSGFVVRKSCQKRL-RSGIIKQKYLVGNRELCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSTKYKLTLF 207
                            99************998887.8888999999999998887776667788878899999999************9998888887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MDSIPNSSVS FDRSSSSQEI GATELSSSSE NVVVSDLPST TEDILISDDV SAKYTEEIVA  60
YEHGDESAAI KKLNALKTPE SFSTRSNFDT PGGTVYYIPK VPVDVLLAKG NVYNSVDECI  120
SAYMKYASKS GFVVRKSCQK RLRSGIIKQK YLVGNRELCP KGIHVDTLDL ENSDKQKRSS  180
NLHITGCKAR VMFELIPGST KYKLTLFIVK AASVNIGATR AHHLLTGLKG SYLLVHGTTV  240
DFKNFFRSVN CYIGDSDAQM LIAKMENRKK HVPDFSFDYL VENPKLSAIF WADEVSMHNY  300
KEFCDVVSFD ATYRTNKYKM MFVPFTVIDN HRKCVTVAAG LLKNETENSY IWLLKAFIKA  360
FGKAPSIVVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-20FAR1 family protein