PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc051136.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 421aa MW: 46092.3 Da PI: 9.8457

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc051136.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	1.9e-05	190	212	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg++F+ ++L++H+ + H Cse_sc051136.1_g010.1 190 VCSQCGEVFPKTESLEHHQAVrH 212 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MALLTSESHK VQSTKHTTTA TTRKKQHQQK PKPKPKSKPK PKQQPTPSSW DQFKNLLTCK 60 QMDVIGPNKV PVPVKNPNGY SKLSSCSSIC SFKDVVHGNT RVVHRADNSP DGSTVGLDAG 120 LLSRKKHVNG GGSSSSSKTL TGSSVRSNVH HVNYTSCSRG MQFRKLSGCY ECHAIVDPSR 180 YTIPRSTICV CSQCGEVFPK TESLEHHQAV RHAVSELGPE DSGRNIVEII FKSSWLKKDH 240 PIFTIERILK VQNTRRTIQR FEDCRDSVKS RASATRCAAD GNELLRFHCT TISCSLGHRN 300 SSSLCSTVPG CGVCTIIRQG FQNPKHGDGG VKTGVRTTAS SGRAHDSLGV DAHARRAMLV 360 CRVIAGKVKR VEDDAPSNED GEVYDSVAGY AGLYSNLEEL YVYNPRAILP CFVVLYKALQ 420 S

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MALLTSESHK VQSTKHTTTA TTRKKQHQQK PKPKPKSKPK PKQQPTPSSW DQFKNLLTCK  60
QMDVIGPNKV PVPVKNPNGY SKLSSCSSIC SFKDVVHGNT RVVHRADNSP DGSTVGLDAG  120
LLSRKKHVNG GGSSSSSKTL TGSSVRSNVH HVNYTSCSRG MQFRKLSGCY ECHAIVDPSR  180
YTIPRSTICV CSQCGEVFPK TESLEHHQAV RHAVSELGPE DSGRNIVEII FKSSWLKKDH  240
PIFTIERILK VQNTRRTIQR FEDCRDSVKS RASATRCAAD GNELLRFHCT TISCSLGHRN  300
SSSLCSTVPG CGVCTIIRQG FQNPKHGDGG VKTGVRTTAS SGRAHDSLGV DAHARRAMLV  360
CRVIAGKVKR VEDDAPSNED GEVYDSVAGY AGLYSNLEEL YVYNPRAILP CFVVLYKALQ  420
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-139	C2H2 family protein