PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc050688.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 137aa MW: 15527.5 Da PI: 10.3223 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.1 | 2.1e-11 | 59 | 114 | 1 | 56 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtra 56 kfY+eYA+e+GF+vr+ ++++k++++ + f+Cs+eg++ + k++ +k+ ++++ Cse_sc050688.1_g010.1 59 KFYKEYARECGFQVRRGGQSNRKKKQNPDLKYFCCSREGTKPSPKSDISKKDKSKT 114 6****************9999999999*************9999988333333332 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 137 aa Download sequence |
EPSTPRSTNI VQDNVVDVES VTQAGSYQPT PPGSKFWIPE AKNKPVEGTQ FDTIEQALKF 60 YKEYARECGF QVRRGGQSNR KKKQNPDLKY FCCSREGTKP SPKSDISKKD KSKTDTPSSD 120 ITEVVKVIKR RKRASQR |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 80 | 111 | RKKKQNPDLKYFCCSREGTKPSPKSDISKKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18960.1 | 1e-06 | FAR1 family protein |