PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc050472.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 333aa    MW: 37711.8 Da    PI: 7.1494
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc050472.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.57.7e-071061484990
                   FAR1  49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                            +k+ +t++   tgCka+ + ++   + k+++t+++ eHnHel 
  Cse_sc050472.1_g010.1 106 DKQVKTSNFRITGCKARTVFHMIPgSRKYKLTTFDVEHNHELD 148
                            56778888899*************9****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEIFDLKPPV SVGEDSIDNS INLAVSSSIC ASNVDDNASS SSSLKTPPSF IHHDFIDTPG  60
GLVFWVPRVA ASVLPLLFSV YDSFEDCISM YMRYASEAGF APKKGDKQVK TSNFRITGCK  120
ARTVFHMIPG SRKYKLTTFD VEHNHELDRV EYKHLSKSER KLTYTEQLFI IKASNYKLDA  180
TRAHSLYTGL KGSSTFVHGT ETEFNNIVHG INCFIGDSDA HMLINRMKDR KNFTSDFSFD  240
YLVENAELIG LFWADQVAKL NYKEFGDIVS FDATYKTNKY RMVFVPFTAI DNHRRFVTAS  300
SGLLKNETIE SYVWLLQAFK KAFVHSPNII VTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-22FAR1 family protein