PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049312.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 338aa    MW: 38114.4 Da    PI: 7.3345
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049312.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.41.7e-11216314182
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 
                            ++Y eYA ++ Fs+rks+sk++  +geit++ + Cs+  k++++  k                  + +++r+++ t tgCka+++ k 
  Cse_sc049312.1_g010.1 216 DMYLEYALKARFSIRKSTSKRK--KGEITHKYLLCSRAEKSRKTIVKdtlvqdkqnddnqndgvkKPRQKRNSNYTVTGCKACVRFKV 301
                            58***************99988..999**********999999887789*************99877888899999***********9 PP

                   FAR1  71 ek.dgkwevtkle 82 
                             + ++ +++++l+
  Cse_sc049312.1_g010.1 302 IHgTSSYKLYSLV 314
                            9988999888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
LLILLYSWDG GRDVCVDLTG SSPLTQSGLI DFMPGRAVID AAQRKRAKYD AKCVETGYGF  60
LPFSFSSFGE LENDAVTLLK RIRRFSMTQD IGARVAVHIF NIIGFAIARG VGAQEDPLKP  120
IQTGESGLIE IYCSETAGES SKVPVETPMQ TTPDVVIQPT LNEDIVNSDE YDPSGNESYD  180
ECIPTPKGHK YWIPEVASEE KPNEGDVFDT FDEAYDMYLE YALKARFSIR KSTSKRKKGE  240
ITHKYLLCSR AEKSRKTIVK DTLVQDKQND DNQNDGVKKP RQKRNSNYTV TGCKACVRFK  300
VIHGTSSYKL YSLVETIITP FWMKITWIFF VSRIFIGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235260KRKKGEITHKYLLCSRAEKSRKTIVK