PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc049240.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 187aa MW: 20936.5 Da PI: 6.2497 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.2 | 1.2e-15 | 35 | 77 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc049240.1_g010.1 35 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 77 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MTSSSNDDVN LLKKKGSWTP EEDAKLIHPN VQHRPFTPHE DDVILRAHLI HGNKWSVISK 60 LLPGRTDNAI KNHWNSTLRR RGLTLTQSSE SESTQSDDND DESLGLKNKR RSCDGMTLLT 120 LLPPGDGEKK KGGDEVEKEI EDTCLVDVMK KMIAKEVRSY IDDLRANDGL SFGAFAPCGP 180 TERVTER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09230.1 | 2e-21 | MYB family protein |