PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc048958.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 567aa MW: 66716.3 Da PI: 6.0159

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc048958.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.6	4.4e-23	188	274	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA GF +r+ +++k+k ++e +++ +vC+keg+++ ++ + +++r rtgC+a+++++++k++kw v+ ++ HnHe Cse_sc048958.1_g010.1 188 EFYNHYAFLHGFGIRIYSTYKNKITKEHYRKIYVCNKEGYKDLKSGD---VKKRRRDLRTGCTARIRISLNKEKKWFVDYFDDVHNHE 272 6****************************************9988...77778889**************************** PP FAR1 89 la 90 l+ Cse_sc048958.1_g010.1 273 LT 274 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MKVEKSLNVT FDESPPLAKT SPLVDDNLVK EESIKDSGKK TLRNEIEDET LDVDEEYTSN 60 DENGIVSIKA FMDLIVDEMV FVGKEQARNT QWVDDSIRKM DDTMDIEIHH EEDPFETSVI 120 GNIDENMYLS NNLSEFEKDM DEEGNNNGID VGSEKDELNS DGMDPEFGNY EDRHVMGKVF 180 DTHDDAYEFY NHYAFLHGFG IRIYSTYKNK ITKEHYRKIY VCNKEGYKDL KSGDVKKRRR 240 DLRTGCTARI RISLNKEKKW FVDYFDDVHN HELTITPSKV MKHRSHGKFH RSMACKSLMS 300 ELGKSGLRPC QIKKVVNTMK SPYDNDVTSK QCSDILGEER KQYRGKEFYG LIKHFQDKII 360 QDRDLYFVVD LFDDGYPRNV FWADGRSRDS YIKFGDVVVF DVTYMTNKFK LPFSPFVGVN 420 HHRQTIIFGG ALLENEKQET FEWLFKEFLK CMFEKHPCAI ITDQDKAIGN AIKNVFPKTR 480 HRYCSWHIKK HEIEHIRSLT IRYNGFQKLY KEWIKSDTIE EFESCWEVLC GTYNIESTKW 540 IQELYDQRFR WAKVFLKDFF VAGIVGS

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MKVEKSLNVT FDESPPLAKT SPLVDDNLVK EESIKDSGKK TLRNEIEDET LDVDEEYTSN  60
DENGIVSIKA FMDLIVDEMV FVGKEQARNT QWVDDSIRKM DDTMDIEIHH EEDPFETSVI  120
GNIDENMYLS NNLSEFEKDM DEEGNNNGID VGSEKDELNS DGMDPEFGNY EDRHVMGKVF  180
DTHDDAYEFY NHYAFLHGFG IRIYSTYKNK ITKEHYRKIY VCNKEGYKDL KSGDVKKRRR  240
DLRTGCTARI RISLNKEKKW FVDYFDDVHN HELTITPSKV MKHRSHGKFH RSMACKSLMS  300
ELGKSGLRPC QIKKVVNTMK SPYDNDVTSK QCSDILGEER KQYRGKEFYG LIKHFQDKII  360
QDRDLYFVVD LFDDGYPRNV FWADGRSRDS YIKFGDVVVF DVTYMTNKFK LPFSPFVGVN  420
HHRQTIIFGG ALLENEKQET FEWLFKEFLK CMFEKHPCAI ITDQDKAIGN AIKNVFPKTR  480
HRYCSWHIKK HEIEHIRSLT IRYNGFQKLY KEWIKSDTIE EFESCWEVLC GTYNIESTKW  540
IQELYDQRFR WAKVFLKDFF VAGIVGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-68	FAR1 family protein