PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc048246.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 302aa    MW: 34127.7 Da    PI: 4.8132
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc048246.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82e-16194244255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +++GVr+++ +g++ Ae r p +    +r +lg++ t+eeAa a+++a+ k +g
  Cse_sc048246.1_g010.1 194 KFRGVRRRP-WGKFTAEMRNPEKK--GARLWLGTYETPEEAAMAYDRAAFKHRG 244
                            89*******.*******9997443..4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MYDPQEHFDF TQLESVRTFL LDDHSETLYN DCYPIDFLDI DTNAMNFPTL SEESSVLADN  60
SGSSSRLLGS YLMEDLIEPL PNLEEFEISS LFHENSNNLV PVTNYSFDNF FSFSSSSDNL  120
NDPIHTQQMI PDNTVDIPAT GSDLSVPINW GFPTGNVVPI AEDNESQPRA KNSNKLNDVK  180
DTVAKALPSL PERKFRGVRR RPWGKFTAEM RNPEKKGARL WLGTYETPEE AAMAYDRAAF  240
KHRGSHALLN FPHLIESHNK HPEKYMTKKR AMTATTSSSS SSSSDSSKNS FEKRNKSCAY  300
ED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-33ERF family protein