PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc048163.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 620aa MW: 71046.6 Da PI: 7.8053

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc048163.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26	3e-08	26	106	7	89
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 A+++GF ++k ++k++ g ++ +f Cs++g++++e + ++ +r++++ +++C +l k k ++ w ++ HnH + Cse_sc048163.1_g010.1 26 AESIGFVIVKGRTKTN--RGYKYSIEFLCSRHGTSAHEGLE-DELERQTSTAKINCPFRLLEKFIKgRNGWILKVKCPRHNHVF 106 899******99988..6667************999.8888899999*****9999989999999999***87 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MSSSPFNTQE VFGNEVALID WVQSTAESIG FVIVKGRTKT NRGYKYSIEF LCSRHGTSAH 60 EGLEDELERQ TSTAKINCPF RLLEKFIKGR NGWILKVKCP RHNHVFVDSF HGFSQAMRLK 120 ESELVLVKQL TKQHVAPQII LSSLKEIDPN NVSTIKTVYN AQENIRRASR APTRFIGPKK 180 GFGQTTTCRV ESQHALLKLH LGSTQSSLDT LLCSVDKIID AQETAIRASL NTSKIKKLHS 240 KWDVDPHQCR HQLLLVYGLP CYHELYWLQA NGLPIPLDFV DNFWRTLSVP WPVVRNTQEP 300 DEPEYPQEPQ GPEEPEYFSC QDDVQKFQSV FTKASSLRGI YAPESVSTQQ PVVKESNRGR 360 PSAKDKKSKA KQNIPDLNEE PPTGHRRSYK KPKKVPDLNE EATRHSSYVG EPSNVPDLNE 420 GPSEGDLRHH LYVPDDISEY FMAQIPPLFR RWILGIFNVA GDGNCGYRAL AVGLGHHERM 480 WPRIRALVRE KVDNNEEVYM QMWGLGHQQE MWPRIRALAR EEVDNNEEVY REMWGDYFTY 540 TRNSMNWFNS AAPRRYWMIM PKTGFVIATA LNRPIISAPA PVLPHLLLQE SDDIQWRDID 600 CVNNTPARVE SPDYVPLMSV

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MSSSPFNTQE VFGNEVALID WVQSTAESIG FVIVKGRTKT NRGYKYSIEF LCSRHGTSAH  60
EGLEDELERQ TSTAKINCPF RLLEKFIKGR NGWILKVKCP RHNHVFVDSF HGFSQAMRLK  120
ESELVLVKQL TKQHVAPQII LSSLKEIDPN NVSTIKTVYN AQENIRRASR APTRFIGPKK  180
GFGQTTTCRV ESQHALLKLH LGSTQSSLDT LLCSVDKIID AQETAIRASL NTSKIKKLHS  240
KWDVDPHQCR HQLLLVYGLP CYHELYWLQA NGLPIPLDFV DNFWRTLSVP WPVVRNTQEP  300
DEPEYPQEPQ GPEEPEYFSC QDDVQKFQSV FTKASSLRGI YAPESVSTQQ PVVKESNRGR  360
PSAKDKKSKA KQNIPDLNEE PPTGHRRSYK KPKKVPDLNE EATRHSSYVG EPSNVPDLNE  420
GPSEGDLRHH LYVPDDISEY FMAQIPPLFR RWILGIFNVA GDGNCGYRAL AVGLGHHERM  480
WPRIRALVRE KVDNNEEVYM QMWGLGHQQE MWPRIRALAR EEVDNNEEVY REMWGDYFTY  540
TRNSMNWFNS AAPRRYWMIM PKTGFVIATA LNRPIISAPA PVLPHLLLQE SDDIQWRDID  600
CVNNTPARVE SPDYVPLMSV