PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc048153.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C3H

Protein Properties

Length: 491aa MW: 55368 Da PI: 9.7435

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc048153.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	23.6	9.2e-08	420	437	8	26
GGGGTS--TTTTT-SS-SS CS zf-CCCH 8 ffartGtCkyGdrCkFaHg 26 +f + GtCk+GdrCkF+H+ Cse_sc048153.1_g020.1 420 HFNK-GTCKFGDRCKFIHD 437 7899.*************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MDFIYPSQPY QPYSPIRSTN LDMNLEDYLP EYNTQNYQSQ DASMGQGSGH GSHHGSFHDS 60 IPVENSDDEK TASAEEMSAI KPKQPSRRAS KAKDKGKKPE TSKGKAKKHV EAWTKAEEVA 120 ICKAWVYVSE NSARGNALNR FKFWELVIDY FKKKKLAQTE PMTPSLPNGR VGFVIGLVIM 180 VLSWRISRIT MEASRIRNRV GNYCAIMENI KNNHGSGEND IDDTSKALRK YRMTYGRDFT 240 LEECWEVLKG HAAWKDTEMT AFQTNSRKKT KGSTTTSGST QARDPFDVQD VDDSDEEGTR 300 ESQPVGRDKA RKKPSSSSHD DDVPSESFAK SLAKTFFKTN KPSKGGKKSL VKFQPTYTYV 360 QLSLFQTEFG LFNQKERRYK PETMSIGDNT PLPPSPTSDH NGTSNNSVNE SQTLPQLSHH 420 FNKGTCKFGD RCKFIHDYRD RPGLAPNKYV GNNVGQIKDA TTGEIRRTVI SPVVPGPLSR 480 VIKYRYMLDS K

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MDFIYPSQPY QPYSPIRSTN LDMNLEDYLP EYNTQNYQSQ DASMGQGSGH GSHHGSFHDS  60
IPVENSDDEK TASAEEMSAI KPKQPSRRAS KAKDKGKKPE TSKGKAKKHV EAWTKAEEVA  120
ICKAWVYVSE NSARGNALNR FKFWELVIDY FKKKKLAQTE PMTPSLPNGR VGFVIGLVIM  180
VLSWRISRIT MEASRIRNRV GNYCAIMENI KNNHGSGEND IDDTSKALRK YRMTYGRDFT  240
LEECWEVLKG HAAWKDTEMT AFQTNSRKKT KGSTTTSGST QARDPFDVQD VDDSDEEGTR  300
ESQPVGRDKA RKKPSSSSHD DDVPSESFAK SLAKTFFKTN KPSKGGKKSL VKFQPTYTYV  360
QLSLFQTEFG LFNQKERRYK PETMSIGDNT PLPPSPTSDH NGTSNNSVNE SQTLPQLSHH  420
FNKGTCKFGD RCKFIHDYRD RPGLAPNKYV GNNVGQIKDA TTGEIRRTVI SPVVPGPLSR  480
VIKYRYMLDS K