PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc048125.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 310aa MW: 35722.4 Da PI: 9.2307 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.9 | 7.9e-19 | 66 | 160 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr+ ++++ +++++f Cskeg+++ + k+ +++ +r r++ rt+Cka++ v ++ +k++v++ Cse_sc048125.1_g010.1 66 AYKDYAAEAGFIVRRGHQTND--GSIVMNKEFLCSKEGTKKVKVKEfdslkdncdAKSVKRIRSKFRTNCKARIYVVRS-GEKYRVKN 150 5***************98877..8889******************9*******99888999999************999.9******* PP FAR1 81 leleHnHela 90 + +eHnH ++ Cse_sc048125.1_g010.1 151 FAEEHNHGFF 160 *******986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MRQNCASNEF VEDENLSAGV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV 60 EEVYKAYKDY AAEAGFIVRR GHQTNDGSIV MNKEFLCSKE GTKKVKVKEF DSLKDNCDAK 120 SVKRIRSKFR TNCKARIYVV RSGEKYRVKN FAEEHNHGFF TAEDRHLQKS HRPMSLAHQY 180 FAIKASNLNI GPCMSFNFIA ELLGGYENIG ATKIDFKNMS RDIYSYIGKY DAQMIIDKFS 240 ILKERDENFT FEFKTNTDDH DFRTCPNNPD RKLLRAKKDI KKSKRTGKKV KRKSNNANAE 300 HGTEEFNFKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-16 | FAR1 family protein |