PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc047919.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 286aa    MW: 31822.6 Da    PI: 7.3886
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc047919.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.71e-34101012102
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+y +++d++++++isw+ +g++fvv+++ +fa+++Lp+ Fkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g
  Cse_sc047919.1_g010.1  10 FLTKTYLLVDDPATDDIISWNGDGTTFVVWKTADFARDLLPNSFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANENFRRG 88 
                            9***************************************************************9999.........*********** PP

                            XXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkks 102
                            +k+ll +i+r+k+
  Cse_sc047919.1_g010.1  89 QKDLLIEIRRRKT 101
                            **********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MTHRSVPAPF LTKTYLLVDD PATDDIISWN GDGTTFVVWK TADFARDLLP NSFKHNNFSS  60
FVRQLNTYGF RKTVPDKWEF ANENFRRGQK DLLIEIRRRK TVTSSQANAN GKPVGDIGPT  120
TSPSNSGDDL GSSSTSSPGS KNPGSVDTPT MEKLENLSDE NEKLKKEKQT LTSELAHMKK  180
QCDDLVAFLT QNVKVAPEQI NRIMKGDVVV GETVTGDVNS NDDDEKEECF KLFGVFLKED  240
KKKRGRDEIN NSLGVQRKEM KMNNCNNATP GMNPFATTGQ STKVCN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241261KKKRGRDEINNSLGVQRKEMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-77HSF family protein