PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc046866.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 30137.9 Da PI: 7.2895 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47 | 6.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l d+v +G g+W+ ++ g+ R +k+c++rw +yl Cse_sc046866.1_g010.1 14 KGLWSPDEDQKLRDYVMNYGHGCWSMVPINAGLQRNGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.9 | 3.1e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+++ +E+e ++ ++ lG++ W++I+++++ gRt++++k++w++yl Cse_sc046866.1_g010.1 67 KGAFSMQEEETILTLHGVLGNK-WSLISHHLP-GRTDNEIKNHWHSYL 112 799*******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MRCKTEKSKM KPKKGLWSPD EDQKLRDYVM NYGHGCWSMV PINAGLQRNG KSCRLRWINY 60 LRPGLKKGAF SMQEEETILT LHGVLGNKWS LISHHLPGRT DNEIKNHWHS YLKKKVPKSE 120 NLETQPKPEC TNSTESSSYM NSITRNTSFD SLDATNGSSF IMEQPATQAQ VNKLPKILFA 180 DWLSLEEFHG HQSVVCKGEI SSGLEYHNAP VNGLLSNEGS SDSNETVNCL NKYSNEDMFH 240 TQMKFDQIFN FTGGDFNIED FLYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 4e-62 | MYB family protein |