PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc046609.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 272aa MW: 31149.7 Da PI: 5.0157

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc046609.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.4e-05	7	28	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHi++H Cse_sc046609.1_g010.1 7 KCDKCAREFCSPVNYRRHIKVH 28 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MKPQMQKCDK CAREFCSPVN YRRHIKVHRR SKKYHKALLL TYLSELLDYS HICATYDMFL 60 IYMAFLSLFS WSLRSRDFLG AFWDKLAYDE AQDIMSLDDV NLEEVPGSSI VKEIAAYLRK 120 PNYLSLTQVY WKAGSALLNI IQGRPPMLPV SSKELFSVLD DASERSFLCA GTAESLQKFV 180 FNGEAGKIVF ELRNLFACAT DEDDDSDVDL FGEETEEEKK VAEERAAAVK ASGKKKSSIL 240 LDVKPWDDET DMQKLEEVVR TKLEPVEYGM KI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-51	C2H2 family protein