PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc046513.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 314aa MW: 35887.6 Da PI: 6.3982

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc046513.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.3e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde l +++++G ++W++ +++ g++R++k+c++rw +yl Cse_sc046513.1_g010.1 15 KGPWTPEEDEVLTSYIQKHGHDSWRALPKRAGLNRCGKSCRLRWINYL 62 79********************************************97 PP
2	Myb_DNA-binding	56.2	7.7e-18	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+ l++ ++ lG++ W++Ia+ ++ gRt++++k++w++++ Cse_sc046513.1_g010.1 68 RGKFTEEEENLIISLHSTLGNK-WSRIASQLP-GRTDNEIKNYWNTHM 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MGRPPCCNES SDLKKGPWTP EEDEVLTSYI QKHGHDSWRA LPKRAGLNRC GKSCRLRWIN 60 YLRPDIKRGK FTEEEENLII SLHSTLGNKW SRIASQLPGR TDNEIKNYWN THMRKKFLKE 120 GIDPQTHKPV PTLSLLLNAI SQLNASSSNF PFRVPNLMSP LNNINDQLLH NILQIINMTP 180 LPNINKLSTF LNSQCDFKKP DEFLSDEMIY QYLMNPSEDW AKYVNNVALE PNSECNSSGT 240 HLIGSYGDGI QFRETFTDCK GSSDNIFIEN QLPGLLPMSP EETKNNEVIN NTNMLQSSAF 300 QSGVDDYYDI LMKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-75	MYB family protein