PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc046446.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 888aa MW: 102661 Da PI: 7.6034

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc046446.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.6e-28	85	188	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgk 75 +fY+eYA+++GFs+ +++s++sk+++e+++++f Cs++g+++e++k+ e+++ +r+ ++t+Cka+++vk+++dgk Cse_sc046446.1_g020.1 85 SFYQEYARSMGFSTAIQNSRRSKTSREFIDAKFACSRYGTKREQDKSfnrprsrqgsnqdPENASGRRSCSKTDCKASMHVKRRSDGK 172 5************************************************999998877666777999*************** PP FAR1 76 wevtkleleHnHelap 91 w ++++e++HnH+l p Cse_sc046446.1_g020.1 173 WIIHRFEKDHNHDLLP 188 ***********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 888 aa Download sequence
MDINLRLPSG EHDKEDKDEA KEMTIYMDDD KMNNEDDLGR EIEKLPSDSE GAMISTSLDL 60 VDFKEDINLE PISGMEFESH GEAYSFYQEY ARSMGFSTAI QNSRRSKTSR EFIDAKFACS 120 RYGTKREQDK SFNRPRSRQG SNQDPENASG RRSCSKTDCK ASMHVKRRSD GKWIIHRFEK 180 DHNHDLLPAQ AVSEQTRKMY AAMARQFAEY KNVVGLKIEA SNPFDKSRNM ALETGEANTL 240 CRFFAQMQSI NSNFFYAIDV GEDQRVKNLL WVDAKSRHDY VNFCDAVSFD TTYVRNKYRM 300 PLALFIGVNQ HYQFMLLGCA LLSDETTATY HWVMQTWLTA MSGRAPKVVI TDKDPFLESA 360 VSQAFPSSKH CFFLWNIMGK ISEVLNQVIK QNDNFMAKFD KCIYRSWTDE QFDKRWFKMV 420 DRVGLKDSEW MQSLYDSRKR WVPIFMRDVF LAGMSTFQRS ESVNCFFDKY VHRKTTVQEL 480 VRQYENIIQD RYEEEAKGDS DTWNRPPILK SPSPFEKHVS SIYTHAVFRK FQAEVLGAVA 540 CMPKKEAHED MTLSFRVSEF EKNLDFNVYY NESTFEVSCT CRLFEFKGFL CRHALIVLQI 600 CGLANIPSQY ILKRWTKDVK NKGIIEGPEV VPYRVQRYND LCQRAIKVGE EGSLSQESYN 660 LAVRELENVY ANCVCVNNSN KNLIEAGPST APRIEEDNQN RNMRTNKKKN PMKKRKVSSE 720 QDIMTVGAQD SLQQLDKLSS RSVAMDGYFG PPQSMQGMVQ LNLMAPSRDY NFGNQQTIQG 780 LGQLNSIAPN HESYYGTPPT LLGMDFFRTP GFTYGIRVSV SKPCYRIHID VAKWSGQAVI 840 PERHSQYQPI NLFICQWEHS QTEGGYIGFD GNLPFCPVKQ NERHKLER

Sequence ? help Back to Top

Protein Sequence Length: 888 aa Download sequence

MDINLRLPSG EHDKEDKDEA KEMTIYMDDD KMNNEDDLGR EIEKLPSDSE GAMISTSLDL  60
VDFKEDINLE PISGMEFESH GEAYSFYQEY ARSMGFSTAI QNSRRSKTSR EFIDAKFACS  120
RYGTKREQDK SFNRPRSRQG SNQDPENASG RRSCSKTDCK ASMHVKRRSD GKWIIHRFEK  180
DHNHDLLPAQ AVSEQTRKMY AAMARQFAEY KNVVGLKIEA SNPFDKSRNM ALETGEANTL  240
CRFFAQMQSI NSNFFYAIDV GEDQRVKNLL WVDAKSRHDY VNFCDAVSFD TTYVRNKYRM  300
PLALFIGVNQ HYQFMLLGCA LLSDETTATY HWVMQTWLTA MSGRAPKVVI TDKDPFLESA  360
VSQAFPSSKH CFFLWNIMGK ISEVLNQVIK QNDNFMAKFD KCIYRSWTDE QFDKRWFKMV  420
DRVGLKDSEW MQSLYDSRKR WVPIFMRDVF LAGMSTFQRS ESVNCFFDKY VHRKTTVQEL  480
VRQYENIIQD RYEEEAKGDS DTWNRPPILK SPSPFEKHVS SIYTHAVFRK FQAEVLGAVA  540
CMPKKEAHED MTLSFRVSEF EKNLDFNVYY NESTFEVSCT CRLFEFKGFL CRHALIVLQI  600
CGLANIPSQY ILKRWTKDVK NKGIIEGPEV VPYRVQRYND LCQRAIKVGE EGSLSQESYN  660
LAVRELENVY ANCVCVNNSN KNLIEAGPST APRIEEDNQN RNMRTNKKKN PMKKRKVSSE  720
QDIMTVGAQD SLQQLDKLSS RSVAMDGYFG PPQSMQGMVQ LNLMAPSRDY NFGNQQTIQG  780
LGQLNSIAPN HESYYGTPPT LLGMDFFRTP GFTYGIRVSV SKPCYRIHID VAKWSGQAVI  840
PERHSQYQPI NLFICQWEHS QTEGGYIGFD GNLPFCPVKQ NERHKLER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein