PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc046267.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 293aa    MW: 32656.9 Da    PI: 10.0755
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc046267.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK44.33.4e-14102145346
                 RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                            +++++e ++++  +pi++AA + gv+ ++LKr CR++GI+ WP 
  Cse_sc046267.1_g020.1 102 DSLRMEAVQQHVGKPINQAAESFGVSRSTLKRFCRENGIMSWPK 145
                            6799***************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
PQYTQISAVT AANTLEYGMD SSYSEPVLAN VAKTDSADVQ SQYSSRENYP NDMSDNINMV  60
GSIEIVNATS YSIVTNQKMS DTTTNAGVKS TTLKRGRKRK IDSLRMEAVQ QHVGKPINQA  120
AESFGVSRST LKRFCRENGI MSWPKPSQST KSSHATDLKM SQVVSQQSSQ RSSSGWFARR  180
QVVLFVARVK RLSSLGRHSY LHSKSDSIYQ EAQVTVKAIF KGDIIKFRFP ISSGLSELKN  240
EVAHRLNLKG KKLSIRYKDK EDDLILITCD DDLHTLQEFL ASNTTVKLLV ASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.12e-08Nin-like family protein