PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc045752.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 28062.1 Da PI: 9.7081 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.9 | 4.9e-18 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd llv+ v+ +G g+W+++a g++R +k+c++rw +yl Cse_sc045752.1_g040.1 16 KGPWTAEEDRLLVQHVNVHGEGRWNSVATLAGLKRNGKSCRLRWVNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.6 | 1.2e-17 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T++E+ l++d+++++G++ W+tIar ++ gRt++++k++w+++ Cse_sc045752.1_g040.1 69 RGRITPQEEALILDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MYYQGVMSGV EEKWRKGPWT AEEDRLLVQH VNVHGEGRWN SVATLAGLKR NGKSCRLRWV 60 NYLRPDLKRG RITPQEEALI LDLHARWGNR WSTIARSLPG RTDNEIKNYW RTHFKKRTKG 120 ASDESTKLKA RLLKRQKFQQ EQRQRLMMQQ NEADMIKVMS LLLEENENKV GHMPLAMIER 180 HQDKVYEEPQ SLINPMILLN GCYDSSYMPV TPMNEEVGLW DGLWSLDEVH GPNFCAARAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-76 | MYB family protein |