PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc044524.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 273aa    MW: 30680.4 Da    PI: 5.9748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc044524.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-1380133155
                            CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                            ++ +hn+ Er RR+r+N+ ++ Lr+llP  a   ++kK+s   ++ +A +YI +Lq
  Cse_sc044524.1_g010.1  80 KKLNHNASERDRRKRVNDLYAYLRSLLPIsA--DQKKKVSIPGMVSRALRYIPELQ 133
                            6789*************************65..78888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MLALPSTLFS TSYGWPLEDN IAPNHQQDCN DVSIDIEANS YISLLDFPLY DQSQHDCAPE  60
SCSSGGATNG NIGDPKKVSK KLNHNASERD RRKRVNDLYA YLRSLLPISA DQKKKVSIPG  120
MVSRALRYIP ELQKEVETLM RKKENLSSYS TSTTNTRQKH LNIERQSTKD AIINTNSSVV  180
SSVSVISETE VVIQLSYSTD HMSNNKEIGS LSRVLEYLES EENGFVLLNL TTFKCPGEET  240
ILNTLHLQVK GDYKIEAEKM KENLCSLYQQ SYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-32bHLH family protein