PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043881.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 451aa    MW: 50904.2 Da    PI: 6.5108
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043881.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS405.74.6e-1241024511374
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            l+e+L++cA+avs++dl  ++ l+++l++l+s +gdp+qRl ay++e+L arl+ s+s++yk            se l  +++f+e++
  Cse_sc043881.1_g010.1 102 LREVLVACAKAVSDNDLCSVELLVSELRQLVSVAGDPIQRLGAYMLEGLVARLSYSGSTIYK------------SEYLVDTNVFYEIC 177
                            6899***************************************************9999995............344555579***** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpf 176
                            P++kf+++ aN aI ea++ e+rvHi+D+ i+qG QW++L+qa+a Rp+gpp++RiTg+++    s   l+ + +rL k+A++ +vpf
  Cse_sc043881.1_g010.1 178 PYFKFGYMSANGAIAEAMKCEKRVHIVDLRIGQGSQWAPLIQAFARRPGGPPHIRITGFHD----SPSGLRVVSKRLCKLAKAYNVPF 261
                            *************************************************************....9********************** PP

                   GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
                            efn+       ++ le++r +pgE+laVn+++ lh+++desvs+++ rd++L+lvks++Pkvv++veqe+++n+++F  rfleal+yy
  Cse_sc043881.1_g010.1 262 EFNI-------EVGLESFRAQPGESLAVNFAYVLHQMPDESVSTRNDRDRILRLVKSMEPKVVTLVEQESNTNTSPFYPRFLEALDYY 342
                            ***9.......899************************************************************************** PP

                   GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                             a+f+s++ +lpre++eri+vE+++l+r++vn++aceg+er+erhe l+kW+ r+++aGF+p p+s  +++++k+ll+++++  y+++
  Cse_sc043881.1_g010.1 343 NAMFESIDITLPREHKERISVEQHCLARDVVNIIACEGDERVERHELLRKWKLRFSMAGFSPSPMSPVVNETIKRLLKNYSD-KYTLK 429
                            *********************************************************************************5.5**** PP

                   GRAS 353 eesgslvlgWkdrpLvsvSaWr 374
                            e++g+l+lgW++r Lv+ +aWr
  Cse_sc043881.1_g010.1 430 ERDGALYLGWMNRDLVASCAWR 451
                            *********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MQASGHNRSI ITNVLNPQFQ YQFQFLDHEI GPYCTLESSS ANGSCTAMYS SQYGHDLKCK  60
LRQLESVMLE DTDSGEDAGN GVVELPEIGI WKEIMGFGKG GLREVLVACA KAVSDNDLCS  120
VELLVSELRQ LVSVAGDPIQ RLGAYMLEGL VARLSYSGST IYKSEYLVDT NVFYEICPYF  180
KFGYMSANGA IAEAMKCEKR VHIVDLRIGQ GSQWAPLIQA FARRPGGPPH IRITGFHDSP  240
SGLRVVSKRL CKLAKAYNVP FEFNIEVGLE SFRAQPGESL AVNFAYVLHQ MPDESVSTRN  300
DRDRILRLVK SMEPKVVTLV EQESNTNTSP FYPRFLEALD YYNAMFESID ITLPREHKER  360
ISVEQHCLAR DVVNIIACEG DERVERHELL RKWKLRFSMA GFSPSPMSPV VNETIKRLLK  420
NYSDKYTLKE RDGALYLGWM NRDLVASCAW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein