PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc043784.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 445aa MW: 51482.9 Da PI: 8.6974

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc043784.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	120	214	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +rks++k+ r+g ++++ +vC++eg +++ + + +k+ rt++ t+Cka+ + +++ + k+++t+++ Cse_sc043784.1_g010.1 120 MYMRYASEAGFGIRKSTQKRL-RDGFVKEKYLVCNREGCPKKIHLNtlapkkGDKQVRTSNFRITSCKARAVFHMMPgSRKYRLTTFD 206 8*************99998.9999***********99988899887778888999999*********9****** PP FAR1 83 leHnHela 90 eHnHel Cse_sc043784.1_g010.1 207 VEHNHELD 214 ****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MVEMSTLVNH HILHRHHRTT TVISVTSSTL SHRMEIFYLN EVPVSVGEDS IDLDVTSSIC 60 ASNVDDNASS SSGLKTPSSF IHHDFIDTPG GSVFWVPRVA ASVLPVLFSV YDSVEDCISM 120 YMRYASEAGF GIRKSTQKRL RDGFVKEKYL VCNREGCPKK IHLNTLAPKK GDKQVRTSNF 180 RITSCKARAV FHMMPGSRKY RLTTFDVEHN HELDRVEYKH LSKSERKLTY TEQLFIIKDS 240 NYNIGATRAH RDSDAQMLIN RMEDRKKFTS DFSFDYLVEN AELIGLFWAD QVAKLNYKEF 300 GDIVSFDATY KSNKYRMVFV PFTAIDNHRR YVTVGSGLLK NETTESYVWL LQAFKKAFVR 360 SPNIIVTDQD GAMRKAIAEV LPDSKHRLCM WHIMQNLPSK IVLRIYDDTD FKNKFHKIVW 420 NMYIGPEEFE MRWNELMVEF GLLNH

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MVEMSTLVNH HILHRHHRTT TVISVTSSTL SHRMEIFYLN EVPVSVGEDS IDLDVTSSIC  60
ASNVDDNASS SSGLKTPSSF IHHDFIDTPG GSVFWVPRVA ASVLPVLFSV YDSVEDCISM  120
YMRYASEAGF GIRKSTQKRL RDGFVKEKYL VCNREGCPKK IHLNTLAPKK GDKQVRTSNF  180
RITSCKARAV FHMMPGSRKY RLTTFDVEHN HELDRVEYKH LSKSERKLTY TEQLFIIKDS  240
NYNIGATRAH RDSDAQMLIN RMEDRKKFTS DFSFDYLVEN AELIGLFWAD QVAKLNYKEF  300
GDIVSFDATY KSNKYRMVFV PFTAIDNHRR YVTVGSGLLK NETTESYVWL LQAFKKAFVR  360
SPNIIVTDQD GAMRKAIAEV LPDSKHRLCM WHIMQNLPSK IVLRIYDDTD FKNKFHKIVW  420
NMYIGPEEFE MRWNELMVEF GLLNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-39	FAR1 family protein