PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043126.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 692aa    MW: 76021.5 Da    PI: 6.2561
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043126.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS419.23.6e-1283326912374
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                             +lLl+cAeavs++++e+a+++L ++sel++p+g++ qR+aayf eA++arl++s+ ++y +lpp+ + ++  ++ ++a+++f+ +sP
  Cse_sc043126.1_g010.1 332 LTLLLQCAEAVSADNFEEANKMLLEISELSTPYGTSAQRVAAYFSEAMSARLMSSCLGIYTTLPPNVALPQALKKMTSAFQVFNGISP 419
                            579************************************************************************************* PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                            ++kfsh+taNqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g+    s ++le+tg+rL++fA++lg+pfe
  Cse_sc043126.1_g010.1 420 FVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGN----SLDALEATGKRLSDFADKLGLPFE 503
                            ************************************************************....9*********************** PP

                   GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
                            f++ va+++ +l++e+L+v+++Ea+aV++    h+l+d ++s ++    +L+++++l Pkvv+vveq+++h ++sFl rf+ea++yys
  Cse_sc043126.1_g010.1 504 FSA-VADKVGNLNPERLKVSKREAVAVHWLQ--HSLYDVTGSDTN----TLWFLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYS 583
                            ***.8*************************9..999999999999....**********************.899************* PP

                   GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee 353
                            alfdsl +++++eseer++vE++ll++ei+nv+a  g +r  + + +++Wre+le++GFk ++l  +aa+qa lll +++s+gy++ e
  Cse_sc043126.1_g010.1 584 ALFDSLGSSYGEESEERHVVEQQLLSKEIRNVLAIGGPSRSGEIK-FNNWREKLEQCGFKGISLAGNAAAQATLLLGMFPSNGYTLVE 670
                            ***************************************888776.****************************************** PP

                   GRAS 354 esgslvlgWkdrpLvsvSaWr 374
                            ++g+l lgWkd  L+++SaWr
  Cse_sc043126.1_g010.1 671 DKGTLKLGWKDLCLLTASAWR 691
                            ********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 692 aa     Download sequence    
MVRKRTASDM EHQTAHQRLI RRPNPPLDIV GFGQNETINN NVNVNTSSTG IGGDISNYST  60
MTLPSLSTST NTANVMSLST TNSTTSNNIY NNIMDSNNKN NPPPPLCNFS GLPLFPPDRN  120
ISYQLPVTLS QPVMLPTDDN MTATAWIDSI IKDLIHTSTD VSIPHLIHNV REIIHPCNPN  180
LATLLEYRLR SLTDPLPTHP PTLVVDHHHH QVTPAADNNS SLSVVVSQQK QHNTSAISRL  240
EDSQQQQHGH LDWGGVPNVT NDDYNTSGNA PPPSNNQEQQ QQPQDSPPAT AAPATDQNAV  300
AASAQAAAVL LREKKREEMR QQKRDEQGLH LLTLLLQCAE AVSADNFEEA NKMLLEISEL  360
STPYGTSAQR VAAYFSEAMS ARLMSSCLGI YTTLPPNVAL PQALKKMTSA FQVFNGISPF  420
VKFSHFTANQ AIQEAFERED RVHIIDLDIM QGLQWPGLFH ILASRPGGPP FVRLTGLGNS  480
LDALEATGKR LSDFADKLGL PFEFSAVADK VGNLNPERLK VSKREAVAVH WLQHSLYDVT  540
GSDTNTLWFL QRLAPKVVTV VEQDLSHAGS FLGRFVEAIH YYSALFDSLG SSYGEESEER  600
HVVEQQLLSK EIRNVLAIGG PSRSGEIKFN NWREKLEQCG FKGISLAGNA AAQATLLLGM  660
FPSNGYTLVE DKGTLKLGWK DLCLLTASAW RP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein