PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc042881.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 134aa MW: 15724.6 Da PI: 11.1077 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.5e-17 | 64 | 105 | 1 | 43 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 +g+WT+ Ed+ l+++v+++G W+tIa++++ gR +kqc++r Cse_sc042881.1_g010.1 64 KGPWTKKEDKDLIRLVEKYGAQKWSTIAQHLP-GRIGKQCRER 105 79******************************.********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MILQTRHFKP GICTAQSTSR MKNHANGTLL MAHKVSKESM LNVSRTEQTC LHRWQKVLNP 60 ELVKGPWTKK EDKDLIRLVE KYGAQKWSTI AQHLPGRIGK QCRERPSNLD FFMAHMVIHM 120 KLFLWMLGRL NIRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 9e-33 | MYB family protein |