PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc042651.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 635aa MW: 69527.9 Da PI: 4.9615

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc042651.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1e-12	444	489	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L Cse_sc042651.1_g010.1 444 NHVEAERQRREKLNQKFYALRAVVPNV-----SKMDKASLLGDAISYINDL 489 799*********************6.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MTMNIWNSDD NAMMDAFMSS DMFSIWGTPA TPAGAPAGPG PGLVVPPASS SASTSAAIGS 60 EWNQDTLQQR LQGLIDNARE SWTYAIFWQS SGVDYTAPSV LGWGDGYYKG EVNKPKTVQS 120 VTSIAEQEHR KKVLRELNSL ISGSQSQENE TVDEEVTDTE WFFLISMTQS FVNGHGLPGQ 180 AMFSNQPVWI TGRDRLSVSH CERARQGQVF GIQTIVCLPS SNGVVELGST ELIFQSLDLI 240 NQVKVLFNFG NSSLDLAPLD ADDQDQNTDP SSMWLNDPPP VSSGTTVNTV EMKDTGDVRA 300 VVPPKETAVV PLNKSVHTEN TTKSVVNNSS HQGLSGSREL NFSGFGCKPE SVELVNFGDS 360 NKKKKAHGLH GINEGGMMSF SSGMVVPPPD NVKSGGVMSA ADFDQSDIEA SIGREAESRL 420 VVEPEKKPRK RGRKPANGRE EPLNHVEAER QRREKLNQKF YALRAVVPNV SKMDKASLLG 480 DAISYINDLK SKLDSTTTDK EELKDQLDAM KKELLSKDSR QSSSSTVSPP EDQMTPNPSN 540 PILNDLDIDV KIIGWDAMLR IQSGKKNHPS ARLMAALKDL DLEVHHASVS VVNELMMQQA 600 TVKMGSRFYT EDQLRIALTN RMSDPSENER PLPQK

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MTMNIWNSDD NAMMDAFMSS DMFSIWGTPA TPAGAPAGPG PGLVVPPASS SASTSAAIGS  60
EWNQDTLQQR LQGLIDNARE SWTYAIFWQS SGVDYTAPSV LGWGDGYYKG EVNKPKTVQS  120
VTSIAEQEHR KKVLRELNSL ISGSQSQENE TVDEEVTDTE WFFLISMTQS FVNGHGLPGQ  180
AMFSNQPVWI TGRDRLSVSH CERARQGQVF GIQTIVCLPS SNGVVELGST ELIFQSLDLI  240
NQVKVLFNFG NSSLDLAPLD ADDQDQNTDP SSMWLNDPPP VSSGTTVNTV EMKDTGDVRA  300
VVPPKETAVV PLNKSVHTEN TTKSVVNNSS HQGLSGSREL NFSGFGCKPE SVELVNFGDS  360
NKKKKAHGLH GINEGGMMSF SSGMVVPPPD NVKSGGVMSA ADFDQSDIEA SIGREAESRL  420
VVEPEKKPRK RGRKPANGRE EPLNHVEAER QRREKLNQKF YALRAVVPNV SKMDKASLLG  480
DAISYINDLK SKLDSTTTDK EELKDQLDAM KKELLSKDSR QSSSSTVSPP EDQMTPNPSN  540
PILNDLDIDV KIIGWDAMLR IQSGKKNHPS ARLMAALKDL DLEVHHASVS VVNELMMQQA  600
TVKMGSRFYT EDQLRIALTN RMSDPSENER PLPQK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	426	434	KKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-161	bHLH family protein