PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc042566.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 285aa    MW: 31652.1 Da    PI: 5.1662
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc042566.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-092102491054
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            ++RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k L
  Cse_sc042566.1_g020.1 210 QKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFL 249
                            79*****************97.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEPISTLFGE ERSFFSGINS SDEADFMSSL FSNFSAKVSN VSTYQDASAF WPHHEPTMNT  60
DEANEVSVSI SDNTHATMPL LFQEDSYPES NSIFFPTSSG ESSYLSVSCS RSIPKGMSAT  120
PSEYNNLSPN TRKHSCDEAD VHHTSWKRPK ISRSQSTNTL DSDNDSKNAA MLNTNGKKRA  180
NSGSAVDSQS VYAKVANLPN SNDVNLCLSQ KRREKINERL RILQNLVPNG TKVDISTMLE  240
EAVQYVKFLK LQIKLLSSDD MWMYAPIAYN GMDLGLDDVK LPSPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.39e-54bHLH family protein