PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc042518.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 325aa    MW: 37573.8 Da    PI: 6.9018
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc042518.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.25.3e-08921265590
                   FAR1  55 raetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            r+e rt+Cka++ v ++  +k++v+++ +eHnH ++
  Cse_sc042518.1_g020.1  92 RSEFRTNCKARIYVVRS-GEKYRVKHFAEEHNHGFF 126
                            7788**********999.9**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKPVVVKSLV PVEGTLFDSV  60
EEAYKAYKDY AAEAGFIVRR GHQTNDGGIR IRSEFRTNCK ARIYVVRSGE KYRVKHFAEE  120
HNHGFFTAED RHLQKSHRSM SLAHQYFAIK ASNLNIGHCM SFNFIAELLG GYENVGATKI  180
DFKNMSRDIY RYIGKYDAQM IIDKFSILKE RDENFTFEFK TNTDVFGDVL SFDATYKTNM  240
YNMVFVPFTG VDNHKKCVIF ACGLLSKEDV VSYKWLLQAF LNTRIKEPYF VLTDQDPSML  300
IAIPDMFKTA KHRLCMWHIM NKLPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-31FAR1 family protein