PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc042280.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 637aa MW: 74015.8 Da PI: 9.8244

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc042280.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.3	2.2e-17	45	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++k+ ++ + ++g + + +C+keg +++ + + +ek++r+++ + tgC+a+++++++ +gk++++k+ Cse_sc042280.1_g010.1 45 DMYSTYAEAGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGASRHINVDtldpkhREKQKRNKTLHVTGCQARIRLELDVvSGKYKLIKF 131 58*************99888.7887999999***9998877899998999999999********************** PP FAR1 82 eleHnHela 90 ++HnH l Cse_sc042280.1_g010.1 132 ITKHNHMLI 140 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MRSQRPSLYE HTETPGGSIY WEPHVEGIVV PQDGKYYDTI EEAIDMYSTY AEAGGFQIKK 60 AGQRLTKSGI VQAKYIMCNK EGASRHINVD TLDPKHREKQ KRNKTLHVTG CQARIRLELD 120 VVSGKYKLIK FITKHNHMLI PKEYKHFTKK ERKMTEAEKM FIVKAATNKI GATRAHNLLT 180 SMKGGYEYVH GTSSDFKNHQ RDINIFIGES DAQMLINKME NRKLYVPNFT FQYKVEESEL 240 VAMFWADEVA KCNYKEFGDI VSFNATFRSN KYNMVFVPFT GVDNHKKCVR LGSGMLLKED 300 IESYTWLLKA FMTAFSKEPT IVVTDQDGAM KRAIEDVFTK SKHRLCMRHI HQKIPAKICK 360 EIYNETDFKK RLNKIIWNMF MEPMEFEEKW AKLIEDFGSK NHKWMTIMFK LREMWIPAYF 420 ITSPLFGLMR TTSRSKSENS FLKSFTSPGA TLVSFMMSYE SAMARQHYIQ EYLDFKTLDA 480 TPKCETKLAI KRHAAKVYTR TIFLLVQTEI KEACWTCAIH ELKIEERCEI VTVRDKNPAA 540 YRILNKEVAK ELADEGETVA TEKFVDYKLA IQQKQEIKGI SEAERNERRK SEIEKALQVK 600 KKQMKPCGHC GEKTNLHTKT TCPMNPKARR KAKPANV

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MRSQRPSLYE HTETPGGSIY WEPHVEGIVV PQDGKYYDTI EEAIDMYSTY AEAGGFQIKK  60
AGQRLTKSGI VQAKYIMCNK EGASRHINVD TLDPKHREKQ KRNKTLHVTG CQARIRLELD  120
VVSGKYKLIK FITKHNHMLI PKEYKHFTKK ERKMTEAEKM FIVKAATNKI GATRAHNLLT  180
SMKGGYEYVH GTSSDFKNHQ RDINIFIGES DAQMLINKME NRKLYVPNFT FQYKVEESEL  240
VAMFWADEVA KCNYKEFGDI VSFNATFRSN KYNMVFVPFT GVDNHKKCVR LGSGMLLKED  300
IESYTWLLKA FMTAFSKEPT IVVTDQDGAM KRAIEDVFTK SKHRLCMRHI HQKIPAKICK  360
EIYNETDFKK RLNKIIWNMF MEPMEFEEKW AKLIEDFGSK NHKWMTIMFK LREMWIPAYF  420
ITSPLFGLMR TTSRSKSENS FLKSFTSPGA TLVSFMMSYE SAMARQHYIQ EYLDFKTLDA  480
TPKCETKLAI KRHAAKVYTR TIFLLVQTEI KEACWTCAIH ELKIEERCEI VTVRDKNPAA  540
YRILNKEVAK ELADEGETVA TEKFVDYKLA IQQKQEIKGI SEAERNERRK SEIEKALQVK  600
KKQMKPCGHC GEKTNLHTKT TCPMNPKARR KAKPANV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-67	FAR1 family protein