PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc041132.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 206aa MW: 23407.1 Da PI: 8.0479 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.9 | 8e-19 | 56 | 170 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y k+ GF+ r+ ++k k t + f Cs++g +e+++ k ++k+ r+r++ r+gC Cse_sc041132.1_g010.1 56 NFYVAYDKKGGFDCRRGGQYKAKCFSDATLKYFHCSRQGLNEDSNGKsgdsvtdndiseqseisddshrfsdvKKKQTRKRTSFRCGC 143 6*****************************************999999***********************99899999999****** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l++kk + +evtk+e HnH+l+ Cse_sc041132.1_g010.1 144 SASLTIKKI-GNIYEVTKFEDGHNHPLV 170 *********.9***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MLTENDSVSA DVESVRIRDH VGFYVCGKDG TRTWYPDFLE KPIEGCQFIS IDQAYNFYVA 60 YDKKGGFDCR RGGQYKAKCF SDATLKYFHC SRQGLNEDSN GKSGDSVTDN DISEQSEISD 120 DSHRFSDVKK KQTRKRTSFR CGCSASLTIK KIGNIYEVTK FEDGHNHPLV AEKDMIFLKN 180 SRKMGYTKQH FLYQVSNANF GPAVGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 2e-07 | FAR1 family protein |