PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc040960.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 410aa MW: 47702.2 Da PI: 8.5769 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28 | 7.1e-09 | 72 | 144 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 +Y eYA ++ Fs+rks+sk++k g k g ++++ ++r+ + t ++Cka+++ k + ++ +++++++++HnH+ Cse_sc040960.1_g010.1 72 MYLEYALKARFSIRKSTSKRKK--G---------EKDGGNKTR------QKRNFNYTIMDCKACVRFKAIHgTSSFKLYEFVENHNHP 142 7889999999999999887772..2.........345555554......45589999**************9**************** PP FAR1 89 la 90 l Cse_sc040960.1_g010.1 143 LL 144 95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence |
MDSTTGNYDQ EDTDVNSNED VSTEYSDLDY SEIDDECIPT LKGHKYWIPE VPADENPSEG 60 NVFDTFDEAY DMYLEYALKA RFSIRKSTSK RKKGEKDGGN KTRQKRNFNY TIMDCKACVR 120 FKAIHGTSSF KLYEFVENHN HPLLDENNTD LLKARRKLDF SDKLFIHRAS LSNLGPTKAH 180 RLRVAFMGGY QKVRGKPSDW KNFRRSVNKY IGPRDAQMLV DKMNDRKKHV PNFSFEYHTV 240 DDVLSRMFWT DETMKCNYNT FGDVLAFDAT YRTNRYRMIF VPFTGIDHNK KCVTFGAALF 300 SDETIESYKW ILTAFKQVHV KEPILVVTDQ DLALRNAVEV VFPEAHQRLC MRHITQKLPG 360 KICGEVDSDF EFKKLFHKLI WHALIGKSTS KRKKCEIAHK YLLCSGAEKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-38 | FAR1 family protein |