PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc040750.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 436aa MW: 48012.6 Da PI: 7.319

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc040750.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.2	2.7e-20	255	304	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g Cse_sc040750.1_g010.1 255 KYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFETAEAAARAYDEAALRFRG 304 8******.******93....36***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MRSLVPQSQK ELEEMLNAIG YYSKPPQDTT CPMASNVNAS NDSVESNANG AVGIEKVGDS 60 ALQKPSPSYA GVTSNDPKQH TSNFRRLECN KKANGVDLSV PMKVVEEVNT RKNNNSNDDE 120 VPSSYLLDDM VSSEYSYSRE MSAMVTALTH VVSGQTSSFG VSSNTISSPS FRTAGASALA 180 AGVFSSDSPS STYSSSSSGS FAGHKRVRDQ DETPTPVNQQ HPRLHRVKEE ETPSTNTVIT 240 ARQNQHEEGG ERRRKYRGVR QRPWGKWAAE IRDPQKAARV WLGTFETAEA AARAYDEAAL 300 RFRGNRAKLN FPENAVLLPA QQLLPTTTAT TSISQQPAVT SYYQIPNNIP PSSDYWQYTR 360 LLQSSNNSNN GQQPQVNMLQ QMYNASTMPS LYSQTSSNQY QPLHYSEHNE DNNVTNLHTV 420 PPSWPPGSSQ LRPPNP

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MRSLVPQSQK ELEEMLNAIG YYSKPPQDTT CPMASNVNAS NDSVESNANG AVGIEKVGDS  60
ALQKPSPSYA GVTSNDPKQH TSNFRRLECN KKANGVDLSV PMKVVEEVNT RKNNNSNDDE  120
VPSSYLLDDM VSSEYSYSRE MSAMVTALTH VVSGQTSSFG VSSNTISSPS FRTAGASALA  180
AGVFSSDSPS STYSSSSSGS FAGHKRVRDQ DETPTPVNQQ HPRLHRVKEE ETPSTNTVIT  240
ARQNQHEEGG ERRRKYRGVR QRPWGKWAAE IRDPQKAARV WLGTFETAEA AARAYDEAAL  300
RFRGNRAKLN FPENAVLLPA QQLLPTTTAT TSISQQPAVT SYYQIPNNIP PSSDYWQYTR  360
LLQSSNNSNN GQQPQVNMLQ QMYNASTMPS LYSQTSSNQY QPLHYSEHNE DNNVTNLHTV  420
PPSWPPGSSQ LRPPNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	256	ERRRKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	2e-18	ERF family protein