PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc040436.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 181aa MW: 21939.2 Da PI: 8.8123

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc040436.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.5	1.6e-16	42	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 fY++YAk+ GFsvr + k+ k+ ge ++r+f C +eg++e + +++ + +++ ++ + k+++k+++ ++w+ ++++ e Cse_sc040436.1_g010.1 42 FYQKYAKMNGFSVRYGRFKNIKKPGEKKRRDFFCHREGFPEGKLVDNSIRTKKQRFFKMWMQGKMRIKLKRineifLEEWQFIQFVAE 129 9***************************************9999777777777888888888888887764555689***** PP FAR1 85 HnHela 90 HnH l Cse_sc040436.1_g010.1 130 HNHVLL 135 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MREELFDLNK TPTEKEVESH KENFDTPFIR QCFLSEDEAF IFYQKYAKMN GFSVRYGRFK 60 NIKKPGEKKR RDFFCHREGF PEGKLVDNSI RTKKQRFFKM WMQGKMRIKL KRINEIFLEE 120 WQFIQFVAEH NHVLLSTEEV RFLSSYRCIT IEDENRSLHD EDHKFPKLVV IDLQLVLNGD 180 G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	4e-20	FAR1 family protein