PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc040342.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 637aa MW: 73544.8 Da PI: 7.0182

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc040342.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.7	2.6e-15	102	204	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkek. 72 ++Y+ YA + F vrks skk ng +t++ Cs+ gk+++ ++ ++k+rr++++t t+Cka++ +k Cse_sc040342.1_g010.1 102 NMYKVYAAKGRFGVRKSWSKKW--NGLVTHKYVICSRRGKPKKIAETntlmedvqendnvdgKTKRRRRSSTTLTDCKARICLKVIPg 187 58*************99988..999***********9998899********99999999999***********9 PP FAR1 73 dgkwevtkleleHnHel 89 ++k+e+++ ++HnH+l Cse_sc040342.1_g010.1 188 TNKYELYDWTENHNHPL 204 *************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MVEIVDIVQH PNMSTNPTPE VDPIMDELNH ETIFLPQQDL IMENANYDHY DNNEDDVDVD 60 VYDLDPEFVP TPNGSSYWVP NVPVEEKPKK GTGFDTFQKA VNMYKVYAAK GRFGVRKSWS 120 KKWNGLVTHK YVICSRRGKP KKIAETNTLM EDVQENDNVD GKTKRRRRSS TTLTDCKARI 180 CLKVIPGTNK YELYDWTENH NHPLIVQSNM DLSRARRKLQ YGDYMFIHRA SLTSIGPQKA 240 HKIRVALLGG FDQVRGMPVD WSNFRRAMNL FIGDRDAQIE KPIQYMNIIL QVLGDLDDDF 300 DFRKEFHKLV WNVYIGPEIF EQRWHDLISK YNLSENKWLT DMYAIRERWV PGYFSHLPMC 360 GLMKTTSRSE SSNAFFQVYS SPGNPLVHFM MCFESAMEKQ RYTQRVLDNT TAEKTPVMFT 420 HLAIERHASE VYTHPIFRDV QHEITKGLYS CAQIGSRLEG SVEYCVIRQR DKRNDTVVDA 480 TVSVNQLDGT INCSCGHYNR HGYLCRHVFC VFGIQGTKKI PMNYVTSKVT SSIEECIDLI 540 RNDPEKLEAL LTKIKELKTE IEAELPPQTE PQNKDALYED LLGVKAPPVI IIKNPPDCST 600 KGMRSDVNFI FTSDYTISKS FKCPNYPNKT ILTIDVL

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MVEIVDIVQH PNMSTNPTPE VDPIMDELNH ETIFLPQQDL IMENANYDHY DNNEDDVDVD  60
VYDLDPEFVP TPNGSSYWVP NVPVEEKPKK GTGFDTFQKA VNMYKVYAAK GRFGVRKSWS  120
KKWNGLVTHK YVICSRRGKP KKIAETNTLM EDVQENDNVD GKTKRRRRSS TTLTDCKARI  180
CLKVIPGTNK YELYDWTENH NHPLIVQSNM DLSRARRKLQ YGDYMFIHRA SLTSIGPQKA  240
HKIRVALLGG FDQVRGMPVD WSNFRRAMNL FIGDRDAQIE KPIQYMNIIL QVLGDLDDDF  300
DFRKEFHKLV WNVYIGPEIF EQRWHDLISK YNLSENKWLT DMYAIRERWV PGYFSHLPMC  360
GLMKTTSRSE SSNAFFQVYS SPGNPLVHFM MCFESAMEKQ RYTQRVLDNT TAEKTPVMFT  420
HLAIERHASE VYTHPIFRDV QHEITKGLYS CAQIGSRLEG SVEYCVIRQR DKRNDTVVDA  480
TVSVNQLDGT INCSCGHYNR HGYLCRHVFC VFGIQGTKKI PMNYVTSKVT SSIEECIDLI  540
RNDPEKLEAL LTKIKELKTE IEAELPPQTE PQNKDALYED LLGVKAPPVI IIKNPPDCST  600
KGMRSDVNFI FTSDYTISKS FKCPNYPNKT ILTIDVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-25	FAR1 family protein