PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc039788.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 356aa MW: 40842 Da PI: 6.9559

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc039788.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.8	2.6e-18	154	200	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd l+++v+++Gg+ W+ Ia+++ gR +kqc++rw+++l Cse_sc039788.1_g020.1 154 KGQWTKEEDRVLKQLVEKHGGRKWSYIAQMLK-GRIGKQCRERWHNHL 200 799**************************9.***********97 PP
2	Myb_DNA-binding	52.5	1.2e-16	207	248	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + WT+eEd++l+ +++ G++ W+ Ia++++ gRt++++k++w+ Cse_sc039788.1_g020.1 207 DFWTEEEDKILITTHAEVGNK-WSEIAKKLP-GRTENSIKNHWN 248 67*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEFQTIFKDD PSIFLSSQYL KPDPDAQTED NYPIHDLHVL ENFSPMGPSF HPDYGMPVSE 60 YDPLGPFSYG SGDLEFKPFE VENGCEMMHE YTGSGSFAVV SELDHIVHGD LTQKTKPVGF 120 LAPDEGSCVT GENAGIKKIT GTSCKRNTKT HSSKGQWTKE EDRVLKQLVE KHGGRKWSYI 180 AQMLKGRIGK QCRERWHNHL RPDIKKDFWT EEEDKILITT HAEVGNKWSE IAKKLPGRTE 240 NSIKNHWNAT KRRQYTKRKC RSKWPKPSPI LQNYIKSLNL PRGKSSVNKN KLEKQSSSSL 300 NQYGFDSSDR LVPDFDFNEV PKFALDEKLL EDDSFGSLLD EKKQLDLMEM ISQVDF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEFQTIFKDD PSIFLSSQYL KPDPDAQTED NYPIHDLHVL ENFSPMGPSF HPDYGMPVSE  60
YDPLGPFSYG SGDLEFKPFE VENGCEMMHE YTGSGSFAVV SELDHIVHGD LTQKTKPVGF  120
LAPDEGSCVT GENAGIKKIT GTSCKRNTKT HSSKGQWTKE EDRVLKQLVE KHGGRKWSYI  180
AQMLKGRIGK QCRERWHNHL RPDIKKDFWT EEEDKILITT HAEVGNKWSE IAKKLPGRTE  240
NSIKNHWNAT KRRQYTKRKC RSKWPKPSPI LQNYIKSLNL PRGKSSVNKN KLEKQSSSSL  300
NQYGFDSSDR LVPDFDFNEV PKFALDEKLL EDDSFGSLLD EKKQLDLMEM ISQVDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	9e-81	MYB family protein